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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs6910639 chr6:133120553 A/G 0.000121 486 15.9 14.9 17.93 KM Plot
THCA rs6918193 chr6:87172908 C/T 1.75E-14 480 15 16.8 25.67 KM Plot
THCA rs6918767 chr6:139707585 C/T 5.45E-7 490 10.82 18.2 15 KM Plot
THCA rs6925475 chr6:24454679 A/G 2.51E-7 490 7.43 15.63 16.33 KM Plot
THCA rs6926038 chr6:46121533 A/G 5.45E-5 489 15.7 16.67 27.37 KM Plot
THCA rs6928096 chr6:139362711 A/G 0.000139 490 7.87 16.4 15.68 KM Plot
THCA rs6928183 chr6:110799201 A/G 3.03E-5 490 14.7 15.28 16.37 KM Plot
THCA rs6928279 chr6:79488958 T/C 1.46E-6 489 18.8 17.7 15.65 KM Plot
THCA rs6931523 chr6:139360529 C/T 0.00014 490 15.68 16.63 7.87 KM Plot
THCA rs6933316 chr6:153272167 C/G 0 490 15.17 18.32 6.92 KM Plot
THCA rs6954038 chr7:64249133 G/C 8.13E-9 474 12.6 14.65 16.63 KM Plot
THCA rs6959035 chr7:64249950 G/A 9.56E-9 471 12.6 14.63 16.67 KM Plot
THCA rs6960431 chr7:64257960 T/C 1.78E-15 483 16.3 14.13 17.32 KM Plot
THCA rs6964501 chr7:64258256 T/C 1.67E-15 484 16.27 14.13 17.32 KM Plot
THCA rs6964586 chr7:89588241 A/G 0.000189 488 16.2 14.78 17.77 KM Plot